Career Category
Scientific
Job Description
Role summary
We are seeking a solid Bioinformatics Scientist to design, automate, implement, validate, and execute advanced bioinformatics analyses and reproducible pipelines that support biomarker analysis, translational research, and clinical development. This individual contributor role combines deep technical expertise in NGS/omics analyses, scRNA/spatial omics, data science, contemporary AI technologies and software engineering with solid scientific judgment to translate biological data into robust, reproducible results used by computational biologists, translational scientists, data engineers and clinical teams.

Key responsibilities
Design, develop, validate, automate and maintain end-to-end bioinformatics analysis pipelines and tools for genomics, transcriptomics, single-cell, spatial omics, proteomics, epigenomics, MRD, metabolomics, and related biomarker assays.
Implement reproducible workflows using workflow engines (e.g., Nextflow, Snakemake) and containerization (e.g., Docker); ensure provenance,



versioning and CI/CD for pipelines.
Lead the design and optimization of production-grade bioinformatics pipelines and analytical workflows, driving improvements in runtime efficiency, memory footprint, scalability, reproducibility, and cost-effectiveness for large-scale genomic and multi-omics analyses.
Design and implement scalable multi-omics integration frameworks that combine genomic, transcriptomic, proteomic, imaging, and clinical data to enable biomarker discovery, patient stratification, predictive modeling, and data-driven decision-making in drug development and clinical trials.
Develop state-of-the art agentic workflows, build agents capable of QC, tool selection, execution optimization, and results interpretation
Define and execute QC, benchmarking and validation strategies for pipelines and algorithms; perform evaluation and assessment of technical wetlab platforms through data; produce metrics and

📌 Bioinformatics Scientist Hyderabad
🏢 AMGEN
📍 Hyderabad