Career Category
Clinical
Job Description
Bioinformatics & AI Engineer
Location: Amgen India office, Hyderabad
Employment type: Full-time
Department / Team: Computational Biology, Precision Medicine
Role summary
We are seeking a Bioinformatics & AI Engineer to build, evaluate, and deploy deep learning and foundation-model-enabled systems that accelerate biomarker discovery, translational research, and clinical development. This individual contributor role combines bioinformatics, machine learning, and software engineering to turn genomic, multi-omics, imaging, and clinical data into reliable, traceable scientific capabilities. The engineer will develop and evaluate biological foundation-model applications and supporting platforms, working closely with computational biologists, data engineers, translational scientists, and clinical teams.

Key responsibilities
• Design, develop, validate, and operate foundation-model-enabled applications for genomics, transcriptomics, single-cell and spatial omics, proteomics, imaging, and clinical data.




• Adapt and evaluate biological foundation models, protein and sequence models, multimodal models, and large language models for biomarker discovery, target identification, patient stratification, and scientific decision support.
• Build robust model development workflows spanning data curation, representation learning, fine-tuning or parameter-productive adaptation, retrieval augmentation, evaluation, and monitored deployment.
• Engineer scalable, reproducible pipelines for preparing and harmonizing multi-omics and clinical datasets, with clear provenance, versioning, quality controls, and fit-for-purpose access controls.
• Develop agentic workflows that combine foundation models with validated bioinformatics tools, structured knowledge, and human review to support research planning, quality control, analysis execution, and result interpretation.
• Define rigorous benchmarking and validation strategies, including biological relevance,

📌 Bioinformatics & AI Engineer (Hyderabad)
🏢 AMGEN
📍 Hyderabad